CDS

Accession Number TCMCG066C17208
gbkey CDS
Protein Id XP_034591303.1
Location join(38532626..38533051,38533669..38533775,38534236..38534980)
Gene LOC117853055
GeneID 117853055
Organism Setaria viridis

Protein

Length 425aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034735412.1
Definition tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category J
Description Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K05542        [VIEW IN KEGG]
EC 1.3.1.88        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0002943        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0017150        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCACTGCGCCGACTCGCTCCGCACCTCCCGAGCCCGCGCCGCTTCCTCCGCTCCCTAAACCCTAGCCCCGCCATGTCGCCGGCCGCCGACGCCGCTCACCTAGCCACGGCGGCCGACCCCGACGAGGACCTCTGCTCCAGCGCCGCGGAATCAGCTGCCGCTGCGGCGGAGGAAGTCGCGCCGGCGCGGCCCCTCCCGCGGCCTCCGGTCTCCGCGGAGGAGAGGATCGAGCGCGCGTGGTCGCACTGGAGGCGCCTGGGAGCCCCGCGGCTGATGGTGGCGCCGATGGTGGACAACTCCGAGCTTCCGTTCCGCATGCTGTGCCGCCGCTACGGCGCCGACGCGGCATACACGCCCATGCTCCACTCCCGCATCTTCTCCGAGAACGAGAAGTACAGGTCCATGGAGTTTACCACGTGCAAGGAGGACCGTCCACTTTTTGTTCAGTTTTGTGCAAATGACCCTGACATTTTGTTACAAGCTGCAAAGATGGTGGAACCATATTGCGACTATGTTGATATCAATTTCGGATGCCCGCAGCGTATTGCAAGACGGGGGAACTATGGAGCATTTCTCATGGACAACCTTCCCCTAGTAAAATCCCTTGTGCAGAATCTATCAGCTAACCTTCATGTTCCAGTCTCTGTTAAGATTCGCATATTTCCACGGTTGGAAGATACATTAGCCTATGCAAAGATGCTCGAGGAAGCTGGTGCTTCTCTTGTGGCTGTCCATGGTCGGACAAGAGATGAAAAGGATGGGAAGAAATTTCGAGCTGACTGGGATGCCATCAAGGCCGTCAAAGATGCTCTAAGAGTACCTGTTCTTGCAAATGGAAACATTCGCCATATGGAGGATGTTAACAACTGCCTGGAACATACTGGTGCTGATGGTGTGCTTTCAGCTGAAACTCTTTTAGAAAATCCAGCACTCTTTGCTGGTTTCAGAACAAAGGAATGGAAAGACGATGGTGATGAGAATGGAGATAGCGGCTTGGACCAGGCTGATCTAGTGATCGAATATTTGAAGCTGTGTGAGCAGTACCCTGTGCCGTGGAGAATGGTTCGATCTCATGTCCACAAGATGTTGGGGGACTGGTTCAGGGTGCATCCAGAGGTGAGGGAGGAACTCAACAAGCAGAACAAACTCACCTTCGAATGGCTGCATGACATGGTATTGAGGTTGAAGGAACTCGGTGGAAGAGTACCACTTTACAGAAAAGAGAGTGCACTGCAGACAACAACAGCGAATGGGGTAGCTGCTAGTAATGCCTGA
Protein:  
MPLRRLAPHLPSPRRFLRSLNPSPAMSPAADAAHLATAADPDEDLCSSAAESAAAAAEEVAPARPLPRPPVSAEERIERAWSHWRRLGAPRLMVAPMVDNSELPFRMLCRRYGADAAYTPMLHSRIFSENEKYRSMEFTTCKEDRPLFVQFCANDPDILLQAAKMVEPYCDYVDINFGCPQRIARRGNYGAFLMDNLPLVKSLVQNLSANLHVPVSVKIRIFPRLEDTLAYAKMLEEAGASLVAVHGRTRDEKDGKKFRADWDAIKAVKDALRVPVLANGNIRHMEDVNNCLEHTGADGVLSAETLLENPALFAGFRTKEWKDDGDENGDSGLDQADLVIEYLKLCEQYPVPWRMVRSHVHKMLGDWFRVHPEVREELNKQNKLTFEWLHDMVLRLKELGGRVPLYRKESALQTTTANGVAASNA